Repository of Reproducible Computations

Free Statistics

of Irreproducible Research!

Author's title

Author

*The author of this computation has been verified*

R Software Module

rwasp_partialcorrelationmatrix.wasp

Title produced by software

Partial Correlation Matrix

Date of computation

Mon, 12 Dec 2016 23:17:38 +0100

Cite this page as follows

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2016/Dec/12/t1481581092436fkvusip4bivf.htm/, Retrieved Fri, 01 Nov 2024 03:37:19 +0000

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=299007, Retrieved Fri, 01 Nov 2024 03:37:19 +0000

QR Codes:

Paste this QR Code to cite your computation.

Original text written by user:

IsPrivate?

No (this computation is public)

User-defined keywords

Estimated Impact

113

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)

-       [Partial Correlation Matrix] [Partial correlati...] [2016-12-12 22:17:38] [e6dc02234f5305f92311fb16bc25f73e] [Current]

Feedback Forum

Post a new message

Dataseries X:

Download CSV

Histogram

Boxplots

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	1 seconds
R Server	Big Analytics Cloud Computing Center
R Framework error message	The field 'Names of X columns' contains a hard return which cannot be interpreted. Please, resubmit your request without hard returns in the 'Names of X columns'.

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input view raw input (R code)  \tabularnewline
Raw Outputview raw output of R engine  \tabularnewline
Computing time1 seconds \tabularnewline
R ServerBig Analytics Cloud Computing Center \tabularnewline
R Framework error message & The field 'Names of X columns' contains a hard return which cannot be interpreted.
Please, resubmit your request without hard returns in the 'Names of X columns'. \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=299007&T=0

[TABLE]
[ROW]

Summary of computational transaction[/C][/ROW] [ROW]

Raw Input[/C]

view raw input (R code) [/C][/ROW] [ROW]

Raw Output[/C]

view raw output of R engine [/C][/ROW] [ROW]

Computing time[/C]

1 seconds[/C][/ROW] [ROW]

R Server[/C]

Big Analytics Cloud Computing Center[/C][/ROW] [ROW]

R Framework error message[/C][C]

The field 'Names of X columns' contains a hard return which cannot be interpreted.
Please, resubmit your request without hard returns in the 'Names of X columns'.

[/C][/ROW] [/TABLE] Source: https://freestatistics.org/blog/index.php?pk=299007&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=299007&T=0

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	1 seconds
R Server	Big Analytics Cloud Computing Center
R Framework error message	The field 'Names of X columns' contains a hard return which cannot be interpreted. Please, resubmit your request without hard returns in the 'Names of X columns'.

Pearson Correlation Matrix

> r0
            KVDD1     KVDD2     KVDD3   KVDD4\r
KVDD1   1.0000000 0.1456166 0.1452768 0.3309773
KVDD2   0.1456166 1.0000000 0.2419560 0.1065191
KVDD3   0.1452768 0.2419560 1.0000000 0.1472691
KVDD4\r 0.3309773 0.1065191 0.1472691 1.0000000

\begin{tabular}{lllllllll}
\hline
Pearson Correlation Matrix \tabularnewline
> r0
            KVDD1     KVDD2     KVDD3   KVDD4\r
KVDD1   1.0000000 0.1456166 0.1452768 0.3309773
KVDD2   0.1456166 1.0000000 0.2419560 0.1065191
KVDD3   0.1452768 0.2419560 1.0000000 0.1472691
KVDD4\r 0.3309773 0.1065191 0.1472691 1.0000000
 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=299007&T=1

[TABLE]
[ROW][C]Pearson Correlation Matrix[/C][/ROW]
[ROW][C]> r0
            KVDD1     KVDD2     KVDD3   KVDD4\r
KVDD1   1.0000000 0.1456166 0.1452768 0.3309773
KVDD2   0.1456166 1.0000000 0.2419560 0.1065191
KVDD3   0.1452768 0.2419560 1.0000000 0.1472691
KVDD4\r 0.3309773 0.1065191 0.1472691 1.0000000
[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=299007&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=299007&T=1

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Pearson Correlation Matrix

> r0
            KVDD1     KVDD2     KVDD3   KVDD4\r
KVDD1   1.0000000 0.1456166 0.1452768 0.3309773
KVDD2   0.1456166 1.0000000 0.2419560 0.1065191
KVDD3   0.1452768 0.2419560 1.0000000 0.1472691
KVDD4\r 0.3309773 0.1065191 0.1472691 1.0000000

Partial Pearson Correlation Matrix (Shrinkage Method)

> r1
             KVDD1      KVDD2      KVDD3    KVDD4\r
KVDD1   1.00000000 0.08519956 0.07349576 0.25896764
KVDD2   0.08519956 1.00000000 0.18457530 0.04111397
KVDD3   0.07349576 0.18457530 1.00000000 0.08403079
KVDD4\r 0.25896764 0.04111397 0.08403079 1.00000000
attr(,"lambda")
[1] 0.1706798
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    KVDD1     KVDD2     KVDD3   KVDD4\r 
0.9103250 0.9486632 0.9436245 0.9150589

\begin{tabular}{lllllllll}
\hline
Partial Pearson Correlation Matrix (Shrinkage Method) \tabularnewline
> r1
             KVDD1      KVDD2      KVDD3    KVDD4\r
KVDD1   1.00000000 0.08519956 0.07349576 0.25896764
KVDD2   0.08519956 1.00000000 0.18457530 0.04111397
KVDD3   0.07349576 0.18457530 1.00000000 0.08403079
KVDD4\r 0.25896764 0.04111397 0.08403079 1.00000000
attr(,"lambda")
[1] 0.1706798
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    KVDD1     KVDD2     KVDD3   KVDD4\r 
0.9103250 0.9486632 0.9436245 0.9150589 
 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=299007&T=2

[TABLE]
[ROW][C]Partial Pearson Correlation Matrix (Shrinkage Method)[/C][/ROW]
[ROW][C]> r1
             KVDD1      KVDD2      KVDD3    KVDD4\r
KVDD1   1.00000000 0.08519956 0.07349576 0.25896764
KVDD2   0.08519956 1.00000000 0.18457530 0.04111397
KVDD3   0.07349576 0.18457530 1.00000000 0.08403079
KVDD4\r 0.25896764 0.04111397 0.08403079 1.00000000
attr(,"lambda")
[1] 0.1706798
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    KVDD1     KVDD2     KVDD3   KVDD4\r 
0.9103250 0.9486632 0.9436245 0.9150589 
[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=299007&T=2

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=299007&T=2

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Partial Pearson Correlation Matrix (Shrinkage Method)

> r1
             KVDD1      KVDD2      KVDD3    KVDD4\r
KVDD1   1.00000000 0.08519956 0.07349576 0.25896764
KVDD2   0.08519956 1.00000000 0.18457530 0.04111397
KVDD3   0.07349576 0.18457530 1.00000000 0.08403079
KVDD4\r 0.25896764 0.04111397 0.08403079 1.00000000
attr(,"lambda")
[1] 0.1706798
attr(,"lambda.estimated")
[1] TRUE
attr(,"class")
[1] "shrinkage"
attr(,"spv")
    KVDD1     KVDD2     KVDD3   KVDD4\r 
0.9103250 0.9486632 0.9436245 0.9150589

Parameters (Session):

Parameters (R input):

R code (references can be found in the software module):

library(corpcor)
x <- t(y)
(r1 <- pcor.shrink(x))
(r0 <- cor(x))
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Pearson Correlation Matrix',1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste('',RC.texteval('r0'),'
',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable0.tab')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Partial Pearson Correlation Matrix (Shrinkage Method)',1,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,paste('',RC.texteval('r1'),'
',sep=''))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable1.tab')

Free Statistics

Description of Statistical Computation

Tree of Dependent Computations

Dataset

Tables (Output of Computation)

Figures (Output of Computation)

Input Parameters & R Code