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*Unverified author*

R Software Module

rwasp_bootstrapplot1.wasp

Title produced by software

Bootstrap Plot - Central Tendency

Date of computation

Wed, 30 Apr 2014 18:41:12 -0400

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Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?v=date/2014/Apr/30/t1398898342ts2y2f21mkgxa7v.htm/, Retrieved Fri, 17 May 2024 05:35:32 +0000

Statistical Computations at FreeStatistics.org, Office for Research Development and Education, URL https://freestatistics.org/blog/index.php?pk=234746, Retrieved Fri, 17 May 2024 05:35:32 +0000

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Original text written by user:

pool 03034 (prepared 03-03-2014) target conc. 0.25g etOH per 100 mL of blood, bootstrap analyis (error of consensus value estimate as S.E. of the Kernel mode)

IsPrivate?

No (this computation is public)

User-defined keywords

Ca Department of Public Health, FAA pool 03034 March 2014 statistic, Forensic Alcohol analysis

Estimated Impact

159

Family? (F = Feedback message, R = changed R code, M = changed R Module, P = changed Parameters, D = changed Data)

-       [Bootstrap Plot - Central Tendency] [CDPH pool 03034 b...] [2014-04-30 22:41:12] [d41d8cd98f00b204e9800998ecf8427e] [Current]

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Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	11 seconds
R Server	'Herman Ole Andreas Wold' @ wold.wessa.net

\begin{tabular}{lllllllll}
\hline
Summary of computational transaction \tabularnewline
Raw Input & view raw input (R code)  \tabularnewline
Raw Output & view raw output of R engine  \tabularnewline
Computing time & 11 seconds \tabularnewline
R Server & 'Herman Ole Andreas Wold' @ wold.wessa.net \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=234746&T=0

[TABLE]
[ROW][C]Summary of computational transaction[/C][/ROW]
[ROW][C]Raw Input[/C][C]view raw input (R code) [/C][/ROW]
[ROW][C]Raw Output[/C][C]view raw output of R engine [/C][/ROW]
[ROW][C]Computing time[/C][C]11 seconds[/C][/ROW]
[ROW][C]R Server[/C][C]'Herman Ole Andreas Wold' @ wold.wessa.net[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=234746&T=0

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=234746&T=0

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Summary of computational transaction
Raw Input	view raw input (R code)
Raw Output	view raw output of R engine
Computing time	11 seconds
R Server	'Herman Ole Andreas Wold' @ wold.wessa.net

Estimation Results of Bootstrap
statistic	P1	P5	Q1	Estimate	Q3	P95	P99	S.D.	IQR
mean	0.25157	0.25204	0.25277	0.25319	0.2536	0.25432	0.25468	0.00067024	0.00082979
median	0.25199	0.252	0.253	0.253	0.254	0.255	0.255	0.0010025	0.001
midrange	0.25	0.2505	0.2505	0.2505	0.2525	0.253	0.2545	0.0011186	0.002
mode	0.249	0.25	0.25	0.25	0.255	0.258	0.261	0.0026933	0.005
mode k.dens	0.25166	0.25221	0.25296	0.25351	0.25397	0.25477	0.25536	0.00079669	0.0010194

\begin{tabular}{lllllllll}
\hline
Estimation Results of Bootstrap \tabularnewline
statistic & P1 & P5 & Q1 & Estimate & Q3 & P95 & P99 & S.D. & IQR \tabularnewline
mean & 0.25157 & 0.25204 & 0.25277 & 0.25319 & 0.2536 & 0.25432 & 0.25468 & 0.00067024 & 0.00082979 \tabularnewline
median & 0.25199 & 0.252 & 0.253 & 0.253 & 0.254 & 0.255 & 0.255 & 0.0010025 & 0.001 \tabularnewline
midrange & 0.25 & 0.2505 & 0.2505 & 0.2505 & 0.2525 & 0.253 & 0.2545 & 0.0011186 & 0.002 \tabularnewline
mode & 0.249 & 0.25 & 0.25 & 0.25 & 0.255 & 0.258 & 0.261 & 0.0026933 & 0.005 \tabularnewline
mode k.dens & 0.25166 & 0.25221 & 0.25296 & 0.25351 & 0.25397 & 0.25477 & 0.25536 & 0.00079669 & 0.0010194 \tabularnewline
\hline
\end{tabular}
%Source: https://freestatistics.org/blog/index.php?pk=234746&T=1

[TABLE]
[ROW][C]Estimation Results of Bootstrap[/C][/ROW]
[ROW][C]statistic[/C][C]P1[/C][C]P5[/C][C]Q1[/C][C]Estimate[/C][C]Q3[/C][C]P95[/C][C]P99[/C][C]S.D.[/C][C]IQR[/C][/ROW]
[ROW][C]mean[/C][C]0.25157[/C][C]0.25204[/C][C]0.25277[/C][C]0.25319[/C][C]0.2536[/C][C]0.25432[/C][C]0.25468[/C][C]0.00067024[/C][C]0.00082979[/C][/ROW]
[ROW][C]median[/C][C]0.25199[/C][C]0.252[/C][C]0.253[/C][C]0.253[/C][C]0.254[/C][C]0.255[/C][C]0.255[/C][C]0.0010025[/C][C]0.001[/C][/ROW]
[ROW][C]midrange[/C][C]0.25[/C][C]0.2505[/C][C]0.2505[/C][C]0.2505[/C][C]0.2525[/C][C]0.253[/C][C]0.2545[/C][C]0.0011186[/C][C]0.002[/C][/ROW]
[ROW][C]mode[/C][C]0.249[/C][C]0.25[/C][C]0.25[/C][C]0.25[/C][C]0.255[/C][C]0.258[/C][C]0.261[/C][C]0.0026933[/C][C]0.005[/C][/ROW]
[ROW][C]mode k.dens[/C][C]0.25166[/C][C]0.25221[/C][C]0.25296[/C][C]0.25351[/C][C]0.25397[/C][C]0.25477[/C][C]0.25536[/C][C]0.00079669[/C][C]0.0010194[/C][/ROW]
[/TABLE]
Source: https://freestatistics.org/blog/index.php?pk=234746&T=1

Globally Unique Identifier (entire table): ba.freestatistics.org/blog/index.php?pk=234746&T=1

As an alternative you can also use a QR Code:

The GUIDs for individual cells are displayed in the table below:

Estimation Results of Bootstrap
statistic	P1	P5	Q1	Estimate	Q3	P95	P99	S.D.	IQR
mean	0.25157	0.25204	0.25277	0.25319	0.2536	0.25432	0.25468	0.00067024	0.00082979
median	0.25199	0.252	0.253	0.253	0.254	0.255	0.255	0.0010025	0.001
midrange	0.25	0.2505	0.2505	0.2505	0.2525	0.253	0.2545	0.0011186	0.002
mode	0.249	0.25	0.25	0.25	0.255	0.258	0.261	0.0026933	0.005
mode k.dens	0.25166	0.25221	0.25296	0.25351	0.25397	0.25477	0.25536	0.00079669	0.0010194

Figure 1

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Figure 4

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Figure 5

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Figure 6

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Figure 7

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Figure 8

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Figure 9

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Figure 10

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Figure 11

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Parameters (Session):

par1 = 200 ; par2 = 5 ; par3 = 0.00475 ; par4 = P1 P5 Q1 Q3 P95 P99 ;

Parameters (R input):

par1 = 200 ; par2 = 5 ; par3 = 0.00475 ; par4 = P1 P5 Q1 Q3 P95 P99 ;

R code (references can be found in the software module):

par4 <- 'P1 P5 Q1 Q3 P95 P99'
par3 <- '0.00475'
par2 <- '5'
par1 <- '200'
par1 <- as.numeric(par1)
par2 <- as.numeric(par2)
if (par3 == '0') bw <- NULL
if (par3 != '0') bw <- as.numeric(par3)
if (par1 < 10) par1 = 10
if (par1 > 5000) par1 = 5000
library(modeest)
library(lattice)
library(boot)
boot.stat <- function(s,i)
{
s.mean <- mean(s[i])
s.median <- median(s[i])
s.midrange <- (max(s[i]) + min(s[i])) / 2
s.mode <- mlv(s[i], method='mfv')$M
s.kernelmode <- mlv(s[i], method='kernel', bw=bw)$M
c(s.mean, s.median, s.midrange, s.mode, s.kernelmode)
}
(r <- boot(x,boot.stat, R=par1, stype='i'))
bitmap(file='plot1.png')
plot(r$t[,1],type='p',ylab='simulated values',main='Simulation of Mean')
grid()
dev.off()
bitmap(file='plot2.png')
plot(r$t[,2],type='p',ylab='simulated values',main='Simulation of Median')
grid()
dev.off()
bitmap(file='plot3.png')
plot(r$t[,3],type='p',ylab='simulated values',main='Simulation of Midrange')
grid()
dev.off()
bitmap(file='plot7.png')
plot(r$t[,4],type='p',ylab='simulated values',main='Simulation of Mode')
grid()
dev.off()
bitmap(file='plot8.png')
plot(r$t[,5],type='p',ylab='simulated values',main='Simulation of Mode of Kernel Density')
grid()
dev.off()
bitmap(file='plot4.png')
densityplot(~r$t[,1],col='black',main='Density Plot',xlab='mean')
dev.off()
bitmap(file='plot5.png')
densityplot(~r$t[,2],col='black',main='Density Plot',xlab='median')
dev.off()
bitmap(file='plot6.png')
densityplot(~r$t[,3],col='black',main='Density Plot',xlab='midrange')
dev.off()
bitmap(file='plot9.png')
densityplot(~r$t[,4],col='black',main='Density Plot',xlab='mode')
dev.off()
bitmap(file='plot10.png')
densityplot(~r$t[,5],col='black',main='Density Plot',xlab='mode of kernel dens.')
dev.off()
z <- data.frame(cbind(r$t[,1],r$t[,2],r$t[,3],r$t[,4],r$t[,5]))
colnames(z) <- list('mean','median','midrange','mode','mode k.dens')
bitmap(file='plot11.png')
boxplot(z,notch=TRUE,ylab='simulated values',main='Bootstrap Simulation - Central Tendency')
grid()
dev.off()
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Estimation Results of Bootstrap',10,TRUE)
a<-table.row.end(a)
if (par4 == 'P1 P5 Q1 Q3 P95 P99') {
myq.1 <- 0.01
myq.2 <- 0.05
myq.3 <- 0.95
myq.4 <- 0.99
myl.1 <- 'P1'
myl.2 <- 'P5'
myl.3 <- 'P95'
myl.4 <- 'P99'
}
if (par4 == 'P0.5 P2.5 Q1 Q3 P97.5 P99.5') {
myq.1 <- 0.005
myq.2 <- 0.025
myq.3 <- 0.975
myq.4 <- 0.995
myl.1 <- 'P0.5'
myl.2 <- 'P2.5'
myl.3 <- 'P97.5'
myl.4 <- 'P99.5'
}
if (par4 == 'P10 P20 Q1 Q3 P80 P90') {
myq.1 <- 0.10
myq.2 <- 0.20
myq.3 <- 0.80
myq.4 <- 0.90
myl.1 <- 'P10'
myl.2 <- 'P20'
myl.3 <- 'P80'
myl.4 <- 'P90'
}
a<-table.row.start(a)
a<-table.element(a,'statistic',header=TRUE)
a<-table.element(a,myl.1,header=TRUE)
a<-table.element(a,myl.2,header=TRUE)
a<-table.element(a,'Q1',header=TRUE)
a<-table.element(a,'Estimate',header=TRUE)
a<-table.element(a,'Q3',header=TRUE)
a<-table.element(a,myl.3,header=TRUE)
a<-table.element(a,myl.4,header=TRUE)
a<-table.element(a,'S.D.',header=TRUE)
a<-table.element(a,'IQR',header=TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'mean',header=TRUE)
q1 <- quantile(r$t[,1],0.25)[[1]]
q3 <- quantile(r$t[,1],0.75)[[1]]
p01 <- quantile(r$t[,1],myq.1)[[1]]
p05 <- quantile(r$t[,1],myq.2)[[1]]
p95 <- quantile(r$t[,1],myq.3)[[1]]
p99 <- quantile(r$t[,1],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[1],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element( a,signif( sqrt(var(r$t[,1])),par2 ) )
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'median',header=TRUE)
q1 <- quantile(r$t[,2],0.25)[[1]]
q3 <- quantile(r$t[,2],0.75)[[1]]
p01 <- quantile(r$t[,2],myq.1)[[1]]
p05 <- quantile(r$t[,2],myq.2)[[1]]
p95 <- quantile(r$t[,2],myq.3)[[1]]
p99 <- quantile(r$t[,2],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[2],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,2])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'midrange',header=TRUE)
q1 <- quantile(r$t[,3],0.25)[[1]]
q3 <- quantile(r$t[,3],0.75)[[1]]
p01 <- quantile(r$t[,3],myq.1)[[1]]
p05 <- quantile(r$t[,3],myq.2)[[1]]
p95 <- quantile(r$t[,3],myq.3)[[1]]
p99 <- quantile(r$t[,3],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[3],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,3])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'mode',header=TRUE)
q1 <- quantile(r$t[,4],0.25)[[1]]
q3 <- quantile(r$t[,4],0.75)[[1]]
p01 <- quantile(r$t[,4],myq.1)[[1]]
p05 <- quantile(r$t[,4],myq.2)[[1]]
p95 <- quantile(r$t[,4],myq.3)[[1]]
p99 <- quantile(r$t[,4],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[4],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,4])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'mode k.dens',header=TRUE)
q1 <- quantile(r$t[,5],0.25)[[1]]
q3 <- quantile(r$t[,5],0.75)[[1]]
p01 <- quantile(r$t[,5],myq.1)[[1]]
p05 <- quantile(r$t[,5],myq.2)[[1]]
p95 <- quantile(r$t[,5],myq.3)[[1]]
p99 <- quantile(r$t[,5],myq.4)[[1]]
a<-table.element(a,signif(p01,par2))
a<-table.element(a,signif(p05,par2))
a<-table.element(a,signif(q1,par2))
a<-table.element(a,signif(r$t0[5],par2))
a<-table.element(a,signif(q3,par2))
a<-table.element(a,signif(p95,par2))
a<-table.element(a,signif(p99,par2))
a<-table.element(a,signif(sqrt(var(r$t[,5])),par2))
a<-table.element(a,signif(q3-q1,par2))
a<-table.row.end(a)
a<-table.end(a)
table.save(a,file='mytable.tab')

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