| Summary of compuational transaction | |
| Raw Input | view raw input (R code) |
| Raw Output | view raw output of R engine |
| Computing time | 1 seconds |
| R Server | 'Gwilym Jenkins' @ 72.249.127.135 |
| Summary of Dendrogram | |
| Label | Height |
| 1 | 1.81934053986603 |
| 2 | 3.4957116585897 |
| 3 | 3.63180395946697 |
| 4 | 4.33474336033865 |
| 5 | 5.22206855565876 |
| 6 | 5.60267793113257 |
| 7 | 6 |
| 8 | 6.04648658313239 |
| 9 | 6.107372593841 |
| 10 | 6.45368112010501 |
| 11 | 6.81102048154313 |
| 12 | 6.8622153857191 |
| 13 | 7.01284535691469 |
| 14 | 7.17425954367417 |
| 15 | 7.71686464828818 |
| 16 | 8.29095893126965 |
| 17 | 8.38033412221731 |
| 18 | 8.85607136375944 |
| 19 | 8.89381807774367 |
| 20 | 8.95153618101385 |
| 21 | 9.06587006304414 |
| 22 | 9.07634287585039 |
| 23 | 9.66436754267965 |
| 24 | 9.70721381241806 |
| 25 | 10.5976412469945 |
| 26 | 10.9986362791030 |
| 27 | 11.1830228471554 |
| 28 | 11.5021737076085 |
| 29 | 11.5909447414782 |
| 30 | 11.7324336776306 |
| 31 | 11.9050409491106 |
| 32 | 12.0660681251185 |
| 33 | 12.1581248554207 |
| 34 | 12.2596900450215 |
| 35 | 12.3211200789539 |
| 36 | 12.5880896088326 |
| 37 | 12.9359962894243 |
| 38 | 13.4925905592662 |
| 39 | 13.6842975705734 |
| 40 | 13.9989285304269 |
| 41 | 14.2151327816521 |
| 42 | 14.2597335178467 |
| 43 | 14.6860478005487 |
| 44 | 15.189470036838 |
| 45 | 15.2849599279815 |
| 46 | 15.5238526146057 |
| 47 | 16.2120325684351 |
| 48 | 16.867127793433 |
| 49 | 16.8875693928996 |
| 50 | 17.4149361181717 |
| 51 | 18.2436290249500 |
| 52 | 18.5512802792691 |
| 53 | 19.1515012466386 |
| 54 | 19.8547223601842 |
| 55 | 20.2519134898409 |
| 56 | 20.6211056929545 |
| 57 | 21.9752133095449 |
| 58 | 23.1885747729350 |
| 59 | 24.1458070894307 |
| 60 | 24.8131013781027 |
| 61 | 25.4161366064947 |
| 62 | 25.8994208429455 |
| 63 | 26.8467875173176 |
| 64 | 29.0523665129022 |
| 65 | 29.4492784291908 |
| 66 | 29.6536675640636 |
| 67 | 31.7064662174768 |
| 68 | 34.2226533161881 |
| 69 | 37.9618229277784 |
| 70 | 39.0627699990669 |
| 71 | 39.7268171390561 |
| 72 | 41.082234603293 |
| 73 | 42.6697785323524 |
| 74 | 48.6013374301572 |
| 75 | 58.9333521870256 |
| 76 | 61.2185429424778 |
| 77 | 67.1763351188497 |
| 78 | 93.2870837790527 |
| 79 | 141.727026357008 |
 |
| http://127.0.0.1/wessadotnet/public_html/freestatisticsdotorg/blog/date/2007/Nov/05/ho6l94mmmipkqxy1194302172/1f53e1194302319.png (open in new window) |
| http://127.0.0.1/wessadotnet/public_html/freestatisticsdotorg/blog/date/2007/Nov/05/ho6l94mmmipkqxy1194302172/1f53e1194302319.ps (open in new window) |
par4 <- as.logical(par4)
if (par3 == 'TRUE'){
dum = xlab
xlab = ylab
ylab = dum
}
x <- t(y)
hc <- hclust(dist(x),method=par1)
d <- as.dendrogram(hc)
str(d)
mysub <- paste('Method: ',par1)
bitmap(file='test1.png')
if (par4 == 'TRUE'){
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
if (par2 != 'ALL'){
if (par3 == 'TRUE'){
ylab = 'cluster'
} else {
xlab = 'cluster'
}
par2 <- as.numeric(par2)
memb <- cutree(hc, k = par2)
cent <- NULL
for(k in 1:par2){
cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
}
hc1 <- hclust(dist(cent),method=par1, members = table(memb))
de <- as.dendrogram(hc1)
bitmap(file='test2.png')
if (par4 == 'TRUE'){
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
str(de)
}
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- length(x[,1])-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,hc$labels[i])
a<-table.element(a,hc$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
if (par2 != 'ALL'){
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- par2-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,i)
a<-table.element(a,hc1$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
}
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