deel Q2 Dendrogram
| Summary of compuational transaction | |
| Raw Input | view raw input (R code) |
| Raw Output | view raw output of R engine |
| Computing time | 2 seconds |
| R Server | 'Gwilym Jenkins' @ 72.249.127.135 |
| Summary of Dendrogram | |
| Label | Height |
| 1 | 1.43527000944074 |
| 2 | 2.21133443874961 |
| 3 | 2.5 |
| 4 | 2.78208554864871 |
| 5 | 3.31209903233584 |
| 6 | 3.33016516106933 |
| 7 | 3.62767142944341 |
| 8 | 3.64554522671164 |
| 9 | 4.03732584763727 |
| 10 | 4.46094160463909 |
| 11 | 4.73919824442911 |
| 12 | 5.10783711564887 |
| 13 | 5.11957029446807 |
| 14 | 5.42678542048605 |
| 15 | 5.49264750445506 |
| 16 | 5.50726792520574 |
| 17 | 6.32887256522034 |
| 18 | 6.96742948092311 |
| 19 | 7.1014083110324 |
| 20 | 7.32734604068895 |
| 21 | 7.41624236261916 |
| 22 | 8.12201234317024 |
| 23 | 8.27707677867011 |
| 24 | 8.70426158295742 |
| 25 | 8.97593127893952 |
| 26 | 9.33184557100894 |
| 27 | 9.41008788745003 |
| 28 | 9.49797320653737 |
| 29 | 9.63342532765586 |
| 30 | 9.7780366127357 |
| 31 | 10.8775844869988 |
| 32 | 10.9849897587572 |
| 33 | 11.0932411855147 |
| 34 | 11.4893826934431 |
| 35 | 11.7295930420072 |
| 36 | 12.4418513164528 |
| 37 | 14.3391448490011 |
| 38 | 14.9928687645068 |
| 39 | 15.1247316299383 |
| 40 | 15.1608662566339 |
| 41 | 16.8063405942193 |
| 42 | 16.9293629047498 |
| 43 | 18.2144136233904 |
| 44 | 19.4688428696746 |
| 45 | 21.0718313992064 |
| 46 | 25.4898075869372 |
| 47 | 26.7932621860244 |
| 48 | 28.0133373133468 |
| 49 | 29.5135530284135 |
| 50 | 31.8323656778116 |
| 51 | 32.9792526066896 |
| 52 | 37.2312808889184 |
| 53 | 45.9127771504856 |
| 54 | 51.1128890074464 |
| 55 | 53.1906678636262 |
| 56 | 73.5283321668913 |
| 57 | 99.4066206469529 |
| 58 | 242.640006945078 |
| 59 | 546.248787385934 |
 |
| http://127.0.0.1/wessadotnet/public_html/freestatisticsdotorg/blog/date/2007/Nov/05/6f1uns2lprz5i771194293472/1zs791194293598.png (open in new window) |
| http://127.0.0.1/wessadotnet/public_html/freestatisticsdotorg/blog/date/2007/Nov/05/6f1uns2lprz5i771194293472/1zs791194293598.ps (open in new window) |
par4 <- as.logical(par4)
if (par3 == 'TRUE'){
dum = xlab
xlab = ylab
ylab = dum
}
x <- t(y)
hc <- hclust(dist(x),method=par1)
d <- as.dendrogram(hc)
str(d)
mysub <- paste('Method: ',par1)
bitmap(file='test1.png')
if (par4 == 'TRUE'){
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
if (par2 != 'ALL'){
if (par3 == 'TRUE'){
ylab = 'cluster'
} else {
xlab = 'cluster'
}
par2 <- as.numeric(par2)
memb <- cutree(hc, k = par2)
cent <- NULL
for(k in 1:par2){
cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE]))
}
hc1 <- hclust(dist(cent),method=par1, members = table(memb))
de <- as.dendrogram(hc1)
bitmap(file='test2.png')
if (par4 == 'TRUE'){
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub)
} else {
plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub)
}
dev.off()
str(de)
}
load(file='createtable')
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- length(x[,1])-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,hc$labels[i])
a<-table.element(a,hc$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable1.tab')
if (par2 != 'ALL'){
a<-table.start()
a<-table.row.start(a)
a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE)
a<-table.row.end(a)
a<-table.row.start(a)
a<-table.element(a,'Label',header=TRUE)
a<-table.element(a,'Height',header=TRUE)
a<-table.row.end(a)
num <- par2-1
for (i in 1:num)
{
a<-table.row.start(a)
a<-table.element(a,i)
a<-table.element(a,hc1$height[i])
a<-table.row.end(a)
}
a<-table.end(a)
table.save(a,file='mytable2.tab')
}
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